STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG11Spatacsin isoform X1. (2441 aa)    
Predicted Functional Partners:
ZFYVE26
Zinc finger FYVE domain-containing protein 26.
   
 
 0.911
AP5Z1
AP-5 complex subunit zeta-1.
    
 
 0.898
SPG21
Maspardin isoform X1.
      
 0.765
SUSD1
Sushi domain-containing protein 1.
      
 0.755
DSTYK
Dual serine/threonine and tyrosine protein kinase isoform X1.
      
 0.729
WDR45
WD repeat domain phosphoinositide-interacting protein 4 isoform X1.
      
 0.721
TBC1D9B
TBC1 domain family member 9B isoform X1.
      
 0.699
AP5M1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.654
VAPB
Vesicle-associated membrane protein-associated protein B/C.
      
 0.646
SPG7
Paraplegin.
      
 0.621
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.