STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD3Homeobox protein Hox-D3. (432 aa)    
Predicted Functional Partners:
HOXD4
Homeobox protein Hox-D4.
  
  
0.909
HOXA6
Homeobox protein Hox-A6.
   
  
0.619
LOC101365095
Cytochrome c oxidase assembly factor 7.
    
 
 0.526
HMHA1
Minor histocompatibility protein HA-1 isoform X1.
      
 0.522
SBNO2
Protein strawberry notch homolog 2.
      
 0.457
HOXB7
Homeobox protein Hox-B7.
   
  
0.452
HOXD9
Homeobox protein Hox-D9.
   
 
0.451
ZIC4
Zinc finger protein ZIC 4 isoform X1.
    
 
 0.444
PBX3
pre-B-cell leukemia transcription factor 3 isoform X1.
    
 0.409
PBX1
pre-B-cell leukemia transcription factor 1 isoform X1.
    
 0.409
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.