STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF19Transcription factor 19. (345 aa)    
Predicted Functional Partners:
RNF39
RING finger protein 39.
      
 0.768
ABCF1
ATP-binding cassette sub-family F member 1 isoform X1.
  
  
 0.751
LOC101368453
Uncharacterized protein C6orf136 homolog isoform X1.
      
 0.730
GNL1
Guanine nucleotide-binding protein-like 1 isoform X1.
      
 0.728
SUV420H2
Histone-lysine N-methyltransferase SUV420H2.
      
 0.724
AURKB
Aurora kinase B isoform X1; Belongs to the protein kinase superfamily.
   
  
 0.720
GTF2H4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
      
 0.715
LOC101372893
Uncharacterized protein C6orf15 homolog.
      
 0.712
CDCA8
Borealin.
   
  
 0.707
KIF20A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.700
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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