STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHCR1Coiled-coil alpha-helical rod protein 1 isoform X1. (867 aa)    
Predicted Functional Partners:
SH3BP5
SH3 domain-binding protein 5.
      
 0.754
KANSL2
KAT8 regulatory NSL complex subunit 2 isoform X1.
      
 0.748
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
   
  
 0.729
PAWR
PRKC apoptosis WT1 regulator protein.
      
 0.712
PGAP3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
      
 0.698
PSORS1C2
Psoriasis susceptibility 1 candidate gene 2 protein.
 
    
 0.679
LUC7L
Putative RNA-binding protein Luc7-like 1 isoform X1.
      
 0.674
KIF12
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.670
MAPK7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  
 0.660
VARS
valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.629
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.