STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF18pre-mRNA-splicing factor 18. (342 aa)    
Predicted Functional Partners:
SLU7
pre-mRNA-splicing factor SLU7.
  
 0.984
CDC5L
Cell division cycle 5-like protein isoform X1.
   
 
 0.964
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.963
BUD31
Protein BUD31 homolog.
    
 
 0.954
CDC40
pre-mRNA-processing factor 17.
   
 0.926
CWC22
pre-mRNA-splicing factor CWC22 homolog isoform X1.
   
 0.917
PRPF8
pre-mRNA-processing-splicing factor 8.
    
 
 0.903
GGPS1
Geranylgeranyl pyrophosphate synthase isoform X1; Belongs to the FPP/GGPP synthase family.
 
      0.893
DHX38
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.873
CWC25
pre-mRNA-splicing factor CWC25 homolog.
    
 0.867
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.