STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM58ACyclin-related protein FAM58A isoform X1; Belongs to the cyclin family. (250 aa)    
Predicted Functional Partners:
CDK9
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.823
CDK12
Cyclin-dependent kinase 12 isoform X1.
   
 0.784
CDK13
Cyclin-dependent kinase 13 isoform X1.
   
 0.784
SUPT4H1
Transcription elongation factor SPT4.
    
 0.610
ZNF276
Zinc finger protein 276.
    
 0.606
CCNH
cyclin-H isoform X1; Belongs to the cyclin family.
     
 0.582
CTDP1
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
   
 
 0.574
GTF2B
Transcription initiation factor IIB.
     
 0.567
PCF11
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
   
 
 0.539
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.536
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.