STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD1ATP-binding cassette sub-family D member 1. (733 aa)    
Predicted Functional Partners:
ABCD3
ATP-binding cassette sub-family D member 3 isoform X1.
  
0.869
PEX19
Peroxisomal biogenesis factor 19 isoform X1.
    
 0.750
PEX13
Peroxisome biogenesis factor 13.
   
 
 0.699
PEX3
Peroxisomal biogenesis factor 3 isoform X1.
   
 0.691
PEX14
Peroxisomal membrane protein PEX14.
   
 0.651
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.643
HNF1A
Hepatocyte nuclear factor 1-alpha isoform X1.
      
 0.637
SLC25A17
Peroxisomal membrane protein PMP34 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.627
PEX16
Peroxisomal membrane protein PEX16.
     
 0.595
ATAD1
ATPase family AAA domain-containing protein 1; Belongs to the AAA ATPase family.
   
 
 0.591
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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