STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPK3SRSF protein kinase 3 isoform X1. (564 aa)    
Predicted Functional Partners:
SRSF4
Serine/arginine-rich splicing factor 4.
   
 
 0.732
CDC5L
Cell division cycle 5-like protein isoform X1.
    
   0.708
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.681
SRSF5
Serine/arginine-rich splicing factor 5 isoform X1.
   
 
 0.624
SRSF6
Serine/arginine-rich splicing factor 6.
   
 
 0.617
ZNF318
Zinc finger protein 318.
    
 
 0.564
SRSF9
Serine/arginine-rich splicing factor 9.
    
 
 0.562
RHBDL2
Rhomboid-related protein 2; Belongs to the peptidase S54 family.
      
 0.524
LOC105757091
Vomeronasal type-1 receptor.
      
 0.522
RIOK2
Serine/threonine-protein kinase RIO2 isoform X1.
      
 0.521
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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