STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDST4Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4. (872 aa)    
Predicted Functional Partners:
HS2ST1
Heparan sulfate 2-O-sulfotransferase 1 isoform X1.
   
 
 0.641
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.497
GPC5
Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.460
B3GNT2
Hexosyltransferase.
      
 0.453
EOGT
EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1.
      
 0.452
CITED2
Cbp/p300-interacting transactivator 2.
      
 0.440
MYH13
Myosin-13; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.439
ASTN2
Astrotactin-2 isoform X1.
      
 0.436
KCNQ5
Potassium voltage-gated channel subfamily KQT member 5 isoform X1.
      
 0.432
GLCE
D-glucuronyl C5-epimerase isoform X1.
   
 
 0.430
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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