STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)    
Predicted Functional Partners:
CDC40
pre-mRNA-processing factor 17.
    
 0.993
SYF2
pre-mRNA-splicing factor SYF2.
    
 0.992
SNW1
SNW domain-containing protein 1 isoform X1.
    
 0.973
DHX16
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
   
 0.973
CWC22
pre-mRNA-splicing factor CWC22 homolog isoform X1.
   
 0.963
CWC27
Peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X1.
  
 
 
0.962
DHX38
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.962
AQR
RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.
   
 0.960
CDC5L
Cell division cycle 5-like protein isoform X1.
   
 
 0.952
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component isoform X1.
   
 0.948
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.