STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH11G patch domain-containing protein 11. (264 aa)    
Predicted Functional Partners:
CCDC130
Coiled-coil domain-containing protein 130 isoform X1.
    
 
 0.734
RBM17
Splicing factor 45.
    
 
 0.727
NRD1
Nardilysin isoform X1.
    
 
 0.701
SF3B4
Splicing factor 3B subunit 4.
   
 0.690
SF3A2
Splicing factor 3A subunit 2.
   
 
 0.644
U2SURP
U2 snRNP-associated SURP motif-containing protein.
   
 
 0.642
SF3A3
Splicing factor 3A subunit 3 isoform X1.
   
 
 0.639
CCDC97
Coiled-coil domain-containing protein 97.
      
 0.623
FN3KRP
Ketosamine-3-kinase isoform X1; Belongs to the fructosamine kinase family.
      
 0.620
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.576
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.