STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHLHE23Class E basic helix-loop-helix protein 23. (227 aa)    
Predicted Functional Partners:
VAX2
Ventral anterior homeobox 2.
   
  
 0.548
CSDC2
Cold shock domain-containing protein C2.
   
  
 0.535
DLX4
Homeobox protein DLX-4.
   
  
 0.527
MDFI
myoD family inhibitor isoform X1.
    
 
 0.526
RMND5B
Protein RMD5 homolog B.
      
 0.457
CHRNA7
Neuronal acetylcholine receptor subunit alpha-7.
      
 0.441
LHX4
LIM/homeobox protein Lhx4.
   
  
 0.437
ITGA6
Integrin alpha-6 isoform X1; Belongs to the integrin alpha chain family.
      
 0.437
SMIM20
Small integral membrane protein 20.
      
 0.429
BRI3BP
BRI3-binding protein.
      
 0.422
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.