STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF16DDB1- and CUL4-associated factor 16. (216 aa)    
Predicted Functional Partners:
NCAPG
Condensin complex subunit 3.
      
 0.756
FAM184B
Protein FAM184B.
     
 0.732
DDB1
DNA damage-binding protein 1 isoform X1.
    
 0.730
COASY
Bifunctional coenzyme A synthase.
      
 0.629
MED28
Mediator of RNA polymerase II transcription subunit 28.
      
 0.627
CUL4B
cullin-4B; Belongs to the cullin family.
    
 0.624
CUL4A
cullin-4A; Belongs to the cullin family.
    
 0.609
RNF4
E3 ubiquitin-protein ligase RNF4.
      
 0.597
DCAF5
DDB1- and CUL4-associated factor 5 isoform X1.
     
 0.587
ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
      
 0.529
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.