STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCLAF1Bcl-2-associated transcription factor 1 isoform X1. (921 aa)    
Predicted Functional Partners:
THRAP3
Thyroid hormone receptor-associated protein 3.
  
 
0.814
U2SURP
U2 snRNP-associated SURP motif-containing protein.
   
   0.732
MATR3
Matrin-3 isoform X1.
  
 0.707
SCAF11
Protein SCAF11.
  
 
 0.705
SRSF10
Serine/arginine-rich splicing factor 10 isoform X1.
   
 
 0.695
ATRX
Transcriptional regulator ATRX.
   
 0.673
LOC101366939
Transcriptional regulator ATRX-like.
   
 0.673
FEM1B
Protein fem-1 homolog B.
    
 0.638
PRPF40A
pre-mRNA-processing factor 40 homolog A isoform X1.
   
 0.595
LOC101386064
LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A-like.
   
 0.595
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.