STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH19Protocadherin-19 isoform X1. (1145 aa)    
Predicted Functional Partners:
NCKAP1
Nck-associated protein 1 isoform X1.
    
 0.648
QRICH2
Glutamine-rich protein 2.
    
 0.517
NCKAP1L
Nck-associated protein 1-like.
    
 0.509
KCNT1
Potassium channel subfamily T member 1.
      
 0.476
MED12L
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like protein.
      
 0.454
WDR45B
WD repeat domain phosphoinositide-interacting protein 3.
      
 0.452
LCN15
LOW QUALITY PROTEIN: lipocalin-15; Belongs to the calycin superfamily. Lipocalin family.
    
 
 0.450
JKAMP
JNK1/MAPK8-associated membrane protein isoform X1.
      
 0.449
CDKL5
Cyclin-dependent kinase-like 5.
      
 0.440
SLC25A18
Mitochondrial glutamate carrier 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.438
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.