STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101386619Keratin, type I cuticular Ha3-I; Belongs to the intermediate filament family. (404 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog isoform X1.
   
 0.695
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 0.509
LOC101367669
Keratin-associated protein 13-1-like.
   
  
 0.493
DSG4
LOW QUALITY PROTEIN: desmoglein-4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
  
  
 0.486
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.421
ASH2L
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.417
KDM6B
Lysine-specific demethylase 6B isoform X1.
   
 0.416
LOC101386674
Lysine-specific demethylase 6A isoform X1.
    
 0.407
LOC101383856
Lysine-specific demethylase 6A isoform X1.
    
 0.407
LOC105758055
Lysine-specific demethylase 6A-like.
    
 0.407
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.