STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT19Keratin, type I cytoskeletal 19; Belongs to the intermediate filament family. (411 aa)    
Predicted Functional Partners:
EPCAM
Epithelial cell adhesion molecule.
   
  
 0.717
UNC79
Protein unc-79 homolog isoform X1.
   
 0.695
KRT7
Keratin, type II cytoskeletal 7; Belongs to the intermediate filament family.
  
0.657
KRT8
Keratin, type II cytoskeletal 8; Belongs to the intermediate filament family.
   
0.641
AFP
Alpha-fetoprotein.
   
 
 0.623
CTNNB1
Catenin beta-1 isoform X1.
   
 0.603
MUC1
Mucin-1.
   
 0.581
KRAS
GTPase KRas isoform X1.
    
 0.565
CDH1
Cadherin-1; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.564
LGR5
Leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1.
    
 0.560
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.