STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101364721Keratin, type I cuticular Ha1-like; Belongs to the intermediate filament family. (393 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog isoform X1.
   
 0.695
DSG4
LOW QUALITY PROTEIN: desmoglein-4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
  
  
 0.568
LRRC2
Leucine-rich repeat-containing protein 2.
    
 0.550
CCDC82
Coiled-coil domain-containing protein 82.
      
 0.527
GPALPP1
GPALPP motifs-containing protein 1 isoform X1.
      
 0.527
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 0.509
MSANTD4
myb/SANT-like DNA-binding domain-containing protein 4.
    
 0.492
HPDL
4-hydroxyphenylpyruvate dioxygenase.
      
 0.446
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.421
ASH2L
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.417
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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