STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101379071HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family. (254 aa)    
Predicted Functional Partners:
CD74
HLA class II histocompatibility antigen gamma chain.
   
 0.993
LOC101372107
HLA class II histocompatibility antigen, DM alpha chain; Belongs to the MHC class II family.
   
0.979
CD4
T-cell surface glycoprotein CD4.
   
 0.979
LOC101371503
HLA class II histocompatibility antigen, DM beta chain.
   
0.978
LOC101370467
Uncharacterized protein LOC101370467.
  
 0.960
LOC101372409
LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP alpha 1 chain; Belongs to the MHC class II family.
  
 
0.953
LOC101370206
SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like; Belongs to the MHC class II family.
  
 
0.935
LOC101364797
Uncharacterized protein LOC101364797.
    
  0.924
LOC101379947
H-2 class II histocompatibility antigen, E-S beta chain-like.
   
0.916
LOC101370728
DLA class II histocompatibility antigen, DR-1 beta chain-like.
   
0.914
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.