STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NACC2Nucleus accumbens-associated protein 2. (586 aa)    
Predicted Functional Partners:
HMGB4
High mobility group protein B4.
    
 0.631
CCS
Copper chaperone for superoxide dismutase.
      
 0.618
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.547
SEMA4G
semaphorin-4G; Belongs to the semaphorin family.
    
 
 0.540
SMARCAD1
annotation not available
    
 
 0.538
HOXA6
Homeobox protein Hox-A6.
    
 
 0.534
ETV6
Transcription factor ETV6.
    
 
 0.534
STRN
Striatin.
    
 
 0.532
VPS33B
Vacuolar protein sorting-associated protein 33B isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.522
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.511
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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