STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101364128Beta-lactoglobulin-2-like; Belongs to the calycin superfamily. Lipocalin family. (297 aa)    
Predicted Functional Partners:
LALBA
Alpha-lactalbumin isoform X1; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.650
CSN3
Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk; Belongs to the kappa-casein family.
   
 
 0.607
CDC73
Parafibromin.
   
 0.499
PAF1
RNA polymerase II-associated factor 1 homolog isoform X1.
   
 0.464
C8B
Complement component C8 beta chain.
   
 0.455
RBP4
Retinol-binding protein 4 isoform X1; Belongs to the calycin superfamily. Lipocalin family.
      
 0.452
CTU1
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position; Belongs to the TtcA family. CTU1/NCS6/ATPBD3 subfamily.
      
 0.446
LOC105757736
alpha-S2-casein-like.
   
  
 0.430
KRT4
Keratin, type II cytoskeletal 4; Belongs to the intermediate filament family.
    
 
 0.429
CTR9
RNA polymerase-associated protein CTR9 homolog.
    
 0.428
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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