STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT3Protocadherin Fat 3. (4557 aa)    
Predicted Functional Partners:
FJX1
Four-jointed box protein 1.
   
 
 0.678
LIX1L
LIX1-like protein.
   
 0.620
LIX1
Protein limb expression 1 homolog.
   
 0.604
RERE
Arginine-glutamic acid dipeptide repeats protein.
    
 0.536
ATN1
Atrophin-1 isoform X1.
    
 0.536
SUPT4H1
Transcription elongation factor SPT4.
   
  
 0.528
SEMA5B
semaphorin-5B isoform X1.
    
 
 0.523
SMPX
Small muscular protein.
      
 0.523
CACNG3
Voltage-dependent calcium channel gamma-3 subunit.
      
 0.522
TECTB
Beta-tectorin.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.