STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28Ras-related protein Rab-28 isoform X1. (221 aa)    
Predicted Functional Partners:
DENND5A
DENN domain-containing protein 5A isoform X1.
     
 0.799
DENND1C
DENN domain-containing protein 1C.
     
 0.789
DENND3
DENN domain-containing protein 3.
    
 0.778
DENND5B
DENN domain-containing protein 5B isoform X1.
     
 0.774
DENND1A
DENN domain-containing protein 1A isoform X1.
     
 0.745
ZNF653
Zinc finger protein 653.
    
 
 0.735
ZNF692
Zinc finger protein 692 isoform X1.
    
 
 0.729
LOC101367690
Protein C8orf37 homolog.
      
 0.711
ZBTB39
Zinc finger and BTB domain-containing protein 39.
    
 
 0.636
ZNF827
Zinc finger protein 827 isoform X1.
    
 
 0.629
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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