STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARP8Poly [ADP-ribose] polymerase. (853 aa)    
Predicted Functional Partners:
RPL5
60S ribosomal protein L5 isoform X1.
  
 
 0.871
LOC101385100
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.866
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.857
RPL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
   0.840
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.811
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.803
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
   0.797
RPL11
60S ribosomal protein L11 isoform X1; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.791
LOC101363157
60S ribosomal protein L11-like; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.791
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.788
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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