STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP3Vesicle-associated membrane protein 3. (104 aa)    
Predicted Functional Partners:
VAMP2
Vesicle-associated membrane protein 2 isoform X1.
  
 
0.984
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
   
 0.981
STX4
Syntaxin-4 isoform X1; Belongs to the syntaxin family.
    
 0.980
STX16
Syntaxin-16 isoform X1; Belongs to the syntaxin family.
   
 0.980
LOC101366571
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.977
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.977
VAMP1
Vesicle-associated membrane protein 1 isoform X1.
  
 
0.973
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.970
STX3
Syntaxin-3; Belongs to the syntaxin family.
    
 0.951
STX1B
syntaxin-1B; Belongs to the syntaxin family.
    
 0.947
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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