STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOH12CR1Loss of heterozygosity 12 chromosomal region 1 protein isoform X1. (196 aa)    
Predicted Functional Partners:
SNAPIN
SNARE-associated protein Snapin.
   
 
 0.806
LOC101386077
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
      
 0.788
PCMT1
Protein-L-isoaspartate O-methyltransferase.
   
  
 0.787
FXR2
Fragile X mental retardation syndrome-related protein 2.
      
 0.699
IQSEC2
IQ motif and SEC7 domain-containing protein 2 isoform X1.
      
 0.613
LOC101380962
Uncharacterized protein C17orf59 homolog.
    
 
 0.588
SUMF1
Sulfatase-modifying factor 1 isoform X1.
      
 0.588
LOC101384905
UPF0693 protein C10orf32 homolog isoform X1.
    
 
 0.579
CREBL2
cAMP-responsive element-binding protein-like 2.
 
    
 0.568
LRRC58
Leucine-rich repeat-containing protein 58.
      
 0.523
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.