STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSMO1Methylsterol monooxygenase 1; Belongs to the sterol desaturase family. (294 aa)    
Predicted Functional Partners:
NSDHL
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating; Belongs to the 3-beta-HSD family.
   
 0.994
HSD17B7
3-keto-steroid reductase isoform X1.
   
 0.993
SQLE
Squalene monooxygenase.
   
 
 0.986
LOC101381709
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
   
 0.984
TM7SF2
Delta(14)-sterol reductase isoform X1.
   
 0.976
DHCR24
Delta(24)-sterol reductase.
  
 
 0.969
LBR
lamin-B receptor.
   
 0.967
SC5D
Lathosterol oxidase; Belongs to the sterol desaturase family.
  
 
0.947
HMGCS1
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
 
 0.917
FDFT1
Squalene synthase isoform X1.
  
 
 0.912
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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