STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCA5LLebercilin-like protein. (670 aa)    
Predicted Functional Partners:
XKR6
XK-related protein.
      
 0.749
SH3BGR
SH3 domain-binding glutamic acid-rich protein.
      
 0.707
CCM2
Cerebral cavernous malformations 2 protein isoform X1.
    
 
 0.653
MTMR9
Myotubularin-related protein 9.
      
 0.619
LOC101383787
Myotubularin-related protein 9.
      
 0.619
BRWD1
Bromodomain and WD repeat-containing protein 1 isoform X1.
      
 0.607
WDR90
WD repeat-containing protein 90.
    
   0.557
B3GALNT1
Hexosyltransferase.
   
  
 0.528
B3GALT5
Hexosyltransferase.
   
  
 0.528
PSMG1
Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2.
      
 0.523
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.