STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARX2Homeobox protein BarH-like 2. (279 aa)    
Predicted Functional Partners:
PKNOX2
Homeobox protein PKNOX2 isoform X1.
    
 
 0.632
SHISA4
Protein shisa-4.
   
  
 0.527
BNIPL
Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein.
      
 0.527
CTU2
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with CTU1/ATPBD3 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Belongs to the CTU2/NCS2 family.
      
 0.527
SMIM12
Small integral membrane protein 12.
   
  
 0.525
SH3D21
SH3 domain-containing protein 21.
      
 0.522
DCP1B
mRNA-decapping enzyme 1B.
      
 0.522
CLEC2L
C-type lectin domain family 2 member L.
      
 0.522
TCAIM
T-cell activation inhibitor, mitochondrial isoform X1.
      
 0.521
LRRC40
Leucine-rich repeat-containing protein 40.
      
 0.518
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.