STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS15A disintegrin and metalloproteinase with thrombospondin motifs 15. (950 aa)    
Predicted Functional Partners:
ADAM30
Disintegrin and metalloproteinase domain-containing protein 30.
   
 
0.601
CNNM1
Metal transporter CNNM1 isoform X1.
   
  
 0.535
FAM159A
Membrane protein FAM159A isoform X1.
      
 0.523
BCAN
Brevican core protein.
     
 0.516
ACAN
LOW QUALITY PROTEIN: aggrecan core protein.
     
 0.484
SEZ6
Seizure protein 6 homolog isoform X1.
   
  
 0.452
SST
Somatostatin.
   
  
 0.451
ANGPTL6
Angiopoietin-related protein 6.
      
 0.439
PCDH12
Protocadherin-12.
    
 
 0.438
MMP16
Matrix metalloproteinase-16.
    
 
 0.435
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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