STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1CLOW QUALITY PROTEIN: protein artemis. (692 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 0.972
PRKDC
DNA-dependent protein kinase catalytic subunit isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.966
LIG4
DNA ligase.
  
 0.921
XRCC6
LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.
   
 0.885
LOC101381859
X-ray repair cross-complementing protein 6-like isoform X1.
   
 0.885
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.816
MRE11A
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.816
SYMPK
Symplekin isoform X1.
   
 0.797
INTS4
Integrator complex subunit 4.
   
 0.781
FIP1L1
pre-mRNA 3'-end-processing factor FIP1 isoform X1.
    
 0.772
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.