STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLCED-glucuronyl C5-epimerase isoform X1. (637 aa)    
Predicted Functional Partners:
HS6ST1
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
    
 
 0.859
EXT1
Exostosin-1; Belongs to the glycosyltransferase 47 family.
      
 0.765
SLC35B3
Adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X1.
      
 0.734
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.729
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.716
EMC6
ER membrane protein complex subunit 6.
      
 0.697
NDST3
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3.
   
 
 0.663
NDST2
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1.
   
 
 0.661
HS2ST1
Heparan sulfate 2-O-sulfotransferase 1 isoform X1.
   
 
 0.659
EMC3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
      
 0.566
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.