STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCHD1Structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1. (2002 aa)    
Predicted Functional Partners:
EMILIN2
EMILIN-2 isoform X1.
 
    
 0.819
AHCTF1
Protein ELYS.
   
  
 0.711
PDS5A
Sister chromatid cohesion protein PDS5 homolog A isoform X1.
   
  
 0.701
SCAF11
Protein SCAF11.
   
    0.684
PHIP
PH-interacting protein.
   
    0.671
DMXL1
dmX-like protein 1 isoform X1.
   
    0.664
MBTD1
MBT domain-containing protein 1.
   
  
 0.648
LRIF1
Ligand-dependent nuclear receptor-interacting factor 1.
    
 
 0.643
RPS27A
ubiquitin-40S ribosomal protein S27a.
      
 0.626
BAHD1
Bromo adjacent homology domain-containing 1 protein isoform X1.
      
 0.618
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.