STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL14A1Collagen alpha-1(XIV) chain. (1796 aa)    
Predicted Functional Partners:
COL1A2
Collagen alpha-2(I) chain.
  
0.795
DCN
Decorin; May affect the rate of fibrils formation.
   
 
 0.743
COL4A6
Collagen alpha-6(IV) chain.
  
0.720
COL8A2
Collagen alpha-2(VIII) chain.
  
 
0.713
COL4A2
Collagen alpha-2(IV) chain.
  
0.701
COL5A2
Collagen alpha-2(V) chain.
  
0.673
SERPINH1
Serpin H1 isoform X1; Belongs to the serpin family.
   
 0.637
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.606
COL3A1
Collagen alpha-1(III) chain.
  
0.599
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.550
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.