STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BANF2Barrier-to-autointegration factor-like protein. (90 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 0.950
LMNB1
lamin-B1 isoform X1; Belongs to the intermediate filament family.
   
 0.822
LMNA
Lamin isoform X1; Belongs to the intermediate filament family.
   
 0.779
VRK1
Serine/threonine-protein kinase VRK1 isoform X1; Belongs to the protein kinase superfamily.
    
 0.762
LMNB2
lamin-B2; Belongs to the intermediate filament family.
   
 0.745
LEMD3
Inner nuclear membrane protein Man1.
   
 0.713
ANKLE2
Ankyrin repeat and LEM domain-containing protein 2 isoform X1.
    
 0.707
LMNTD1
Lamin tail domain-containing protein 1.
   
 0.632
RBM39
RNA-binding protein 39 isoform X2.
   
 0.625
RBM23
Probable RNA-binding protein 23.
   
 0.625
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.