STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM65CProtein FAM65C. (944 aa)    
Predicted Functional Partners:
LOC101377909
Transmembrane protease serine; Belongs to the peptidase S1 family.
     
 0.634
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.631
LOC105757892
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.631
LOC105758044
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.631
EFCAB5
EF-hand calcium-binding domain-containing protein 5.
    
 0.540
ERICH6
Glutamate-rich protein 6.
    
 0.540
TNFAIP2
Tumor necrosis factor alpha-induced protein 2.
      
 0.524
LOC101363580
Uncharacterized protein C4orf45 homolog.
      
 0.521
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 
 0.507
GLE1
Nucleoporin GLE1.
   
 0.464
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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