STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS2A disintegrin and metalloproteinase with thrombospondin motifs 2. (1213 aa)    
Predicted Functional Partners:
COL1A1
Collagen alpha-1(I) chain.
   
 0.690
COL1A2
Collagen alpha-2(I) chain.
   
 0.682
TNXB
tenascin-X.
   
  
 0.627
AGMAT
Agmatinase, mitochondrial; Belongs to the arginase family.
      
 0.625
ZNF354C
Zinc finger protein 354C.
      
 0.614
COL3A1
Collagen alpha-1(III) chain.
   
 0.595
FBN1
Fibrillin-1.
   
 0.583
B3GALTL
Beta-1,3-glucosyltransferase.
    
 0.568
COL5A2
Collagen alpha-2(V) chain.
   
 0.554
DEPDC4
LOW QUALITY PROTEIN: DEP domain-containing protein 4.
      
 0.518
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.