STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTC4SLeukotriene C4 synthase. (150 aa)    
Predicted Functional Partners:
LTA4H
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
     
 0.959
ALOX5
Arachidonate 5-lipoxygenase isoform X1.
   
 0.926
GGT5
Gamma-glutamyltransferase 5 isoform X1.
     
 0.906
GGT1
Gamma-glutamyltranspeptidase 1 isoform X1.
     
 0.906
PTGES
Prostaglandin E synthase.
    
 0.620
ALOX5AP
LOW QUALITY PROTEIN: arachidonate 5-lipoxygenase-activating protein.
   
0.573
TBXA2R
Thromboxane A2 receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.522
MGST1
Microsomal glutathione S-transferase 1.
    
 0.510
PLA2G4A
Phospholipase A2.
   
  
 0.436
TBXAS1
thromboxane-A synthase isoform X1; Belongs to the cytochrome P450 family.
   
  
 0.403
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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