STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDLBPVigilin. (1268 aa)    
Predicted Functional Partners:
APOA1
Truncated apolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). As part of the SPAP complex, activates spermatozoa motility; Belongs to the apolipoprotein A1/A4/E family.
     
 0.782
LOC101362469
WD repeat-containing protein 5-like.
   
 
 0.613
GNB2L1
Guanine nucleotide-binding protein subunit beta-2-like 1 isoform X1.
   
 
 0.613
DNAJC2
dnaJ homolog subfamily C member 2 isoform X1.
   
   0.599
EEF1G
Elongation factor 1-gamma.
   
 
 0.595
LOC101377372
LOW QUALITY PROTEIN: uncharacterized protein LOC101377372.
   
 
 0.595
DDX6
Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
   
 
 0.560
EPRS
Bifunctional glutamate/proline--tRNA ligase isoform X1.
   
   0.555
RRBP1
Ribosome-binding protein 1.
   
 
 0.548
SND1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
  
 0.543
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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