STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNPEPL1Arginyl aminopeptidase-like 1. (724 aa)    
Predicted Functional Partners:
PDE5A
Phosphodiesterase.
     
 0.667
PREP
Prolyl endopeptidase.
     
 0.555
ATP6V1H
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
   
  
 0.530
CLYBL
Citrate lyase subunit beta-like protein, mitochondrial.
   
 
 0.527
MORN3
MORN repeat-containing protein 3.
      
 0.526
NKD1
Protein naked cuticle homolog 1.
      
 0.525
HN1L
Hematological and neurological expressed 1-like protein.
      
 0.522
HOXC12
Homeobox protein Hox-C12.
      
 0.522
HOXC11
Homeobox protein Hox-C11.
      
 0.491
CAPN10
Calpain-10; Belongs to the peptidase C2 family.
      
 0.448
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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