STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFSP2Ufm1-specific protease 2. (469 aa)    
Predicted Functional Partners:
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
    
 
 0.954
SGSM3
Small G protein signaling modulator 3 isoform X1.
      
 0.805
ZMYM4
Zinc finger MYM-type protein 4 isoform X1.
      
 0.805
UBA5
Ubiquitin-like modifier-activating enzyme 5 isoform X1.
      
 0.765
UFL1
E3 UFM1-protein ligase 1.
   
  
 0.754
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
   
  
 0.737
CDK5RAP3
CDK5 regulatory subunit-associated protein 3 isoform X1.
   
  
 0.710
OTUD3
OTU domain-containing protein 3.
      
 0.692
NUBPL
Iron-sulfur protein NUBPL.
      
 0.690
CCDC86
Coiled-coil domain-containing protein 86.
      
 0.664
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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