STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101373200Protein PAXX isoform X1. (207 aa)    
Predicted Functional Partners:
FAM35A
Protein FAM35A.
      
 0.730
LIG4
DNA ligase.
    
 
 0.681
CTC1
CST complex subunit CTC1.
      
 0.676
LOC101367964
Modulator of retrovirus infection homolog.
      
 0.616
PRKDC
DNA-dependent protein kinase catalytic subunit isoform X1; Belongs to the PI3/PI4-kinase family.
    
 
 0.550
NHEJ1
Non-homologous end-joining factor 1.
    
 
 0.549
APLF
Aprataxin and PNK-like factor isoform X1.
      
 0.529
XRCC5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
    
 
 0.509
SAE1
SUMO-activating enzyme subunit 1 isoform X1.
      
 0.454
POLQ
DNA polymerase theta.
      
 0.450
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.