STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXW5F-box/WD repeat-containing protein 5 isoform X1. (620 aa)    
Predicted Functional Partners:
LOC101374307
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.920
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.920
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.861
FBXO25
F-box only protein 25 isoform X1.
     
 0.795
SEC23B
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 
 0.775
DDB1
DNA damage-binding protein 1 isoform X1.
    
 
 0.737
CUL3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.711
RBX1
E3 ubiquitin-protein ligase RBX1 isoform X1.
    
 0.697
FBXL14
F-box/LRR-repeat protein 14 isoform X1.
     
 0.682
SEC23A
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 
 0.680
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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