STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTRF1LPeptide chain release factor 1-like, mitochondrial isoform X1. (380 aa)    
Predicted Functional Partners:
ICT1
peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.944
MRPS7
28S ribosomal protein S7, mitochondrial.
  
 
 0.932
MRPL20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
 
 
 0.928
MRPS11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
 
 
 0.923
MRPL13
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
 
 
 0.923
MRPS12
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
 
 
 0.922
MRPL49
39S ribosomal protein L49, mitochondrial.
   
 
 0.919
MRPS31
28S ribosomal protein S31, mitochondrial isoform X1.
   
 
 0.917
MRPL27
39S ribosomal protein L27, mitochondrial isoform X1.
  
 
 0.910
MRPL4
39S ribosomal protein L4, mitochondrial.
 
 
 0.907
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.