STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACHD1VWFA and cache domain-containing protein 1. (1290 aa)    
Predicted Functional Partners:
TMEM259
Membralin.
      
 0.872
LOC101380687
Transmembrane emp24 domain-containing protein 7.
      
 0.868
SMPDL3B
Acid sphingomyelinase-like phosphodiesterase.
      
 0.846
STT3A
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X2.
    
 
 0.770
GGCX
Vitamin K-dependent gamma-carboxylase isoform X1.
      
 0.767
SEL1L
Protein sel-1 homolog 1.
      
 0.698
EMC1
ER membrane protein complex subunit 1 isoform X1.
      
 0.681
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
      
 0.667
F11R
Junctional adhesion molecule A.
      
 0.657
SEZ6L2
Seizure 6-like protein 2 isoform X1.
      
 0.645
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.