STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN18Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (261 aa)    
Predicted Functional Partners:
SFTPC
Pulmonary surfactant-associated protein C isoform X1.
   
  
 0.701
LOC101372659
LOW QUALITY PROTEIN: rho GTPase-activating protein 26-like.
      
 0.657
VSIG1
V-set and immunoglobulin domain-containing protein 1.
   
  
 0.626
SFTPD
Pulmonary surfactant-associated protein D.
   
  
 0.608
ZNF536
Zinc finger protein 536.
      
 0.565
SLC34A2
Sodium-dependent phosphate transport protein 2B.
   
  
 0.547
SCGB3A2
Secretoglobin family 3A member 2.
   
  
 0.533
TTC14
Tetratricopeptide repeat protein 14.
      
 0.524
SFTPB
Pulmonary surfactant-associated protein B.
   
  
 0.517
CDX1
Homeobox protein CDX-1.
      
 0.514
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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