STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABPAGA-binding protein alpha chain. (454 aa)    
Predicted Functional Partners:
GABPB1
GA-binding protein subunit beta-1 isoform X1.
   
 0.993
GABPB2
GA-binding protein subunit beta-2 isoform X1.
   
 0.775
METTL23
Methyltransferase-like protein 23 isoform X1.
      
 0.724
ZNF213
Zinc finger protein 213.
    
 
 0.657
LCOR
Ligand-dependent corepressor isoform X1.
    
 
 0.526
LCORL
Ligand-dependent nuclear receptor corepressor-like protein isoform X1.
    
 
 0.526
SCNM1
Sodium channel modifier 1.
      
 0.522
TFAM
Transcription factor A, mitochondrial isoform X1.
   
 
 0.503
ZNF143
Zinc finger protein 143 isoform X1.
   
 
 0.475
EP300
Histone acetyltransferase p300.
   
 
 0.455
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.