STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTP4Receptor-transporting protein 4. (405 aa)    
Predicted Functional Partners:
USP18
LOW QUALITY PROTEIN: ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family.
   
  
 0.922
IFI44
LOW QUALITY PROTEIN: interferon-induced protein 44.
   
  
 0.864
ISG15
Ubiquitin-like protein ISG15.
   
  
 0.825
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
   
  
 0.821
RNF213
E3 ubiquitin-protein ligase RNF213.
   
  
 0.820
IFI44L
LOW QUALITY PROTEIN: interferon-induced protein 44-like.
   
  
 0.758
IRF7
Interferon regulatory factor 7 isoform X1.
   
  
 0.738
LOC101362413
2'-5'-oligoadenylate synthase-like protein.
   
  
 0.715
CMPK2
UMP-CMP kinase 2, mitochondrial.
   
  
 0.709
ZBP1
Z-DNA-binding protein 1.
   
    0.690
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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