STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA6Protein shisa-6 homolog isoform X1. (553 aa)    
Predicted Functional Partners:
GSG1L
Germ cell-specific gene 1-like protein.
      
 0.713
TXLNB
Beta-taxilin.
      
 0.662
SLC6A11
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.641
SLC6A13
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.620
RNF122
RING finger protein 122.
      
 0.596
SLC6A9
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.529
SLC38A5
Sodium-coupled neutral amino acid transporter 5 isoform X1.
      
 0.524
GABBR2
Gamma-aminobutyric acid type B receptor subunit 2.
      
 0.523
GRIN2B
Glutamate receptor ionotropic, NMDA 2B.
      
 0.523
GPR50
Melatonin-related receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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