STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBRG1Transforming growth factor beta regulator 1. (411 aa)    
Predicted Functional Partners:
COPS2
COP9 signalosome complex subunit 2 isoform X1.
   
  
 0.859
SLC29A2
Equilibrative nucleoside transporter 2.
      
 0.834
KNTC1
Kinetochore-associated protein 1.
      
 0.792
FBXO3
F-box only protein 3.
      
 0.768
CHFR
E3 ubiquitin-protein ligase CHFR.
      
 0.761
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
   
 
 0.741
ASH2L
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.738
GDPD5
Glycerophosphodiester phosphodiesterase domain-containing protein 5.
      
 0.737
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.734
GARNL3
GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1.
   
  
 0.731
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.